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  • Abhyankar S, Demner-Fushman D, Callaghan FM, McDonald CJ. Combining structured and unstructured data to identify a cohort of ICU patients who received dialysis. J Am Med Inform Assoc. 2014 Sep-Oct;21(5):801-7. doi: 10.1136/amiajnl-2013-001915. Epub 2014 Jan 2.
  • Abhyankar S, Leishear K, Callaghan FM, Demner-Fushman D, McDonald CJ. Lower short- and long-term mortality associated with overweight and obesity in a large cohort study of adult intensive care unit patients. Crit Care. 2012 Dec 18;16(6):R235. doi: 10.1186/cc11903.
  • Ackerman MJ, Yoo T. The Visible Human Data Sets (VHD) and Insight Toolkit (ITk): experiments in open source software. AMIA Annu Symp Proc [American Medical Informatics Association Annual Symposium Proceedings]; 2003 Nov 8-12; Washington DC. p. 773.
  • Ackerman MJ. The Visible Human Project Moves from Data to Knowledge. Lékař a technika. 2002;33(1):4-12.
  • Ackerman MJ, Banvard RA. Imaging Outcomes from the National Library of Medicine's Visible Human Project. Comput Med Imaging Graph. 2000 May-Jun;24(3):125-6.
  • Anne A, Bagayoko C, Fontelo P. Evaluation de BabelMeSH en Francais. IRBM 2009. DOI: 10.1016/j.irbm.2009.06.006.
  • Antani SK. Automatic x-ray screening for tuberculosis. SPIE Newsroom. October 2015. DOI: 10.1117/2.1201509.006128
  • Antani SK, Deserno TM, Long LR, Thoma GR. Geographically Distributed Complementary Content-Based Image Retrieval Systems for Biomedical Image Informatics Stud Health Technol Inform. 2007;129(Pt 1):493-7
  • Antani SK, Long RL, Thoma GR. Applying Vertebral Boundary Semantics to CBIR of Digitized Spine X-Ray Images Proc SPIE Electronic Imaging Science and Technology, Conference on Storage and Retrieval Methods and Applications for Multimedia. 2005;5682:98-107.
  • Aronson AR, Lang FM. An overview of MetaMap: historical perspective and recent advances. J Am Med Inform Assoc. 2010 May-Jun;17(3):229-36. doi: 10.1136/jamia.2009.002733.
  • Baik SH, Kury F, McDonald CJ. Risk of Alzheimer's Disease Among Senior Medicare Beneficiaries Treated With Androgen Deprivation Therapy for Prostate Cancer. J Clin Oncol. 2017 Oct 20;35(30):3401-3409. doi: 10.1200/JCO.2017.72.6109. Epub 2017 Aug 25.
  • Balkanyi L, Schulz S, Cornet R, Bodenreider O. Medical concept representation: the years beyond 2000 [Poster]. Stud Health Technol Inform. 2013;192:1011.
  • Bangalore A, Browne AC, Divita G. UMLSKS SUGGEST: an auto-complete feature for the UMLSKS interface using AJAX. AMIA Annu Symp Proc. 2006:851.
  • Ben Abacha A, Demner-Fushman D. Meta-Learning with Selective Data Augmentation for Medical Entity Recognition. International Journal of Computational Linguistics and Applications (IJCLA) 7(2): 167-182 (2016)
  • Bennett AE, Narayan K, Shi D, Hartnell LM, Gousset K, He H, Lowekamp BC, Yoo TS, Bliss D, Freed EO, Subramaniam S. Ion-abrasion scanning electron microscopy reveals surface-connected tubular conduits in HIV-infected macrophages. PLoS Pathog. 2009 Sep;5(9):e1000591. doi: 10.1371/journal.ppat.1000591. Epub 2009 Sep 25.
  • Blake C, Rindflesch TC. Leveraging syntax to better capture the semantics of elliptical coordinated compound noun phrases. J Biomed Inform. 2017 Aug;72:120-131. doi: 10.1016/j.jbi.2017.07.001. Epub 2017 Jul 4.
  • Bodenreider O, Peters L, Nguyen T. RxClass – Navigating between Drug Classes and RxNorm Drugs (Demo). Prc. ICBO 2014
  • Borovikov E, Bonifant MC, Lingappa G, Gill MJ, Thoma GR. FaceMatch: a visual search system for family reunification during disasters [Poster]. NIH Research Festival, September 2016
  • Bryant B, Sari-Sarraf H, Wachtel M, Long LR, Antani SK. Fast GPU-based segmentation of H&E stained squamous epithelium from multi-gigapixel tiled virtual slides [Poster]. Proc. SPIE 8676, Medical Imaging 2013: Digital Pathology, 86760X (March 29, 2013); doi:10.1117/12.2007800
  • Butan C, Hartnell LM, Fenton AK, Bliss D, Sockett RE, Subramaniam S, Milne JL. Spiral architecture of the nucleoid in Bdellovibrio bacteriovorus. J Bacteriol. 2011 Mar;193(6):1341-50. doi: 10.1128/JB.01061-10. Epub 2010 Dec 10.
  • Caban JJ, Rheingans P, Yoo TS. An Evaluation of Visualization Techniques to Illustrate Statistical Deformation Models. Computer Graphics Forum. 2011 May-Jun;30(3):821-30. doi:10.1111/j.1467-8659.2011.01931.x.
  • Cairelli M, Rindflesch TC. Identifying Potential Biomarkers for Mild Traumatic Brain Injury by Mining Semantic Relations from MEDLINE Citations [Poster[. 2011 Trauma Spectrum Conference, Bethesda, MD, December 9, 2011.
  • Cairelli MJ, Fiszman M, Zhang H, Rindflesch TC. Networks of neuroinjury semantic predications to identify biomarkers for mild traumatic brain injury. J Biomed Semantics. 2015 May 18;6:25. doi: 10.1186/s13326-015-0022-4. eCollection 2015.
  • Callaghan FM, Leishear K, Abhyankar S, Demner-Fushman D, McDonald CJ. High vitamin B12 levels are not associated with increased mortality risk for ICU patients after adjusting for liver function: a cohort study. ESPEN J. 2014 Apr 1;9(2):e76-e83.
  • Cameron D, Kavuluru R, Rindflesch TC, Sheth AP, Thirunarayan K, Bodenreider O. Context-driven automatic subgraph creation for literature-based discovery. J Biomed Inform. 2015 Apr;54:141-57. doi: 10.1016/j.jbi.2015.01.014. Epub 2015 Feb 7.

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