• Abhyankar S, Demner-Fushman D. A simple method to extract key maternal data from neonatal clinical notes. AMIA Annu Symp Proc. 2013 Nov 16;2013:2-9. eCollection 2013.

  Abstract | PMID:  24551317 | PMCID:  PMC3900117

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• Abhyankar S, Goodwin RM, Zuckerman A, McDonald CJ. Dataset: newborn screening results annotated example HL7 electronic message guidance (v 5.2).

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• Abhyankar S, Therrell B, Eaton R, Cuthbert C, Ojodu J, Copeland S, Goodwin RM, McDonald C. Using LOINC and HL7 to standardize hemoglobinopathy screening result reporting. APHL Newborn Screening and Genetics Testing Symposium. 2011 Nov 7.

  Abstract | pub2011-133.pdf | URL:  http://www.aphl.org/conferences/proceedings/Documents/2011/2011_APHL_NBS_Genetic...

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• Abhyankar S, Goodwin RM, Zuckerman AE, McDonald CJ. Dataset: Newborn screening LOINC panel.

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• Abhyankar S, Goodwin RM, Zuckerman AE, McDonald CJ. Dataset: newborn screening LOINC codes (AHIC panel).

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• Aronson AR, Mork JG, Neveol A, Shooshan SE, Demner-Fushman D. Methodology for Creating UMLS Content Views Appropriate for Biomedical Natural Language Processing AMIA Annu Symp Proc. 2008 Nov 6:21-5

  Abstract | PMID:  18998883 | PMCID:  PMC2655934

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• Aronson AR, Bodenreider O, Demner-Fushman D, Fung KW, Lee VK, Mork JG, Névéol A, Peters L, Rogers WJ. From indexing the biomedical literature to coding clinical text: experience with MTI and machine learning approaches. Proc 2007 Workshop BioNL'07, June 2007, pp. 105-112, Prague, Czech Republic.

  Abstract | pub2007040.pdf

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• Aronson AR, Demner-Fushman D, Humphrey SM, Ide NC, Kim W, Liu H, Loane RF, Mork JG, Smith LH, Tanabe LK, Wilbur WJ, Xie N. Knowledge-intensive and statistical approaches to the retrieval and annotation of genomics MEDLINE citations. The Thirteenth Text Retrieval Conference (TREC 2004). 2004:503-11.

  Abstract | pub2004-076.pdf

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• Aronson AR, Mork JG, Gay CW, Humphrey SM, Rogers W. The NLM Indexing Initiative's Medical Text Indexer. Stud Health Technol Inform. 2004;107(Pt 1):268-72.

  Abstract | pub2004-077.pdf | PMID:  15360816

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• Bangalore AK, Divita G, Humphrey SM, Browne AC, Thorn KE. Automatic Categorization of Google Search Results for Medical Queries using JDI Medinfo 2007: Proc. of the 11th World Congress on Health (Medical) Informatics

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• Bashyam V, Divita G, Bennett DB, Browne AC, Taira RK. A normalized lexical lookup approach to identifying UMLS concepts in free text. Stud Health Technol Inform. 2007;129(Pt 1):545-9.

  Abstract | PMID:  17911776

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• Bhupatiraju R, Fung K, Bodenreider O. MetaMapLite in Excel: Biomedical named-entity recognition for non-technical users. Stud Health Technol Inform (Proc Medinfo): 1252.

  Abstract | PMID:  29295337 | PMCID:  PMC5884681

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• Bodenreider O, Rodriguez L. Analyzing U.S. prescription lists with RxNorm and the ATC/DDD Index. AMIA Annu Symp Proc. 2014 Nov 14;2014:297-306. eCollection 2014.

  Abstract | pub9011.pdf | PMID:  25954332 | PMCID:  PMC4419961

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• Callaghan F, Jackson MT, Demner-Fushman D, Abhyankar S, McDonald C. Analysis of data that has been extracted from free-text using natural language processing: a likelihood model for misclassification with an application to medical informatics. International Conference on Advances in Interdisciplinary Statistics and Combinatorics (AISC2012), Greensboro, NC, October 2012

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• Callaghan F, Jackson MT, Demner-Fushman D, Abhyankar S, McDonald CJ. NLP-derived information improves the estimates of risk of disease compared to estimates based on manually extracted data alone. 5th International Symposium on Semantic Mining in Biomedicine (SMBM 2012), 2012 Sept 3-4, Zurich, Switzerland.

  Abstract | pub2012-068.pdf | URL:  http://www.zora.uzh.ch/64476/65/smbm12.pdf

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• Campbell JR, Xu J, Fung K. Can SNOMED CT fulfill the vision of a compositional terminology? Analyzing the use case for problem list. AMIA Annu Symp Proc. 2011;2011:181-8. Epub 2011 Oct 22.

  Abstract | PMID:  22195069 | PMCID:  PMC3243203

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• Chachra S, Ben Abacha A, Shooshan SE, Rodriguez L, Demner-Fushman D. A Hybrid Approach to Generation of Missing Abstracts in Biomedical Literature. Proceedings of COLING 2016, the 26th International Conference on Computational Linguistics: Technical Papers: 1093-1100.

  Abstract | pub9455.pdf

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• Demner-Fushman D, Abhyankar S. Syntactic-semantic frames for clinical cohort identification queries. Data Integration in the Life Sciences (DILS) June 2012, LNBI 7348 proceedings. Lecture Notes in Computer Science. 2012;7348:100-112

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• Demner-Fushman D, Abhyankar S. Syntactic-semantic question frames for cohort identification. The 2012 Joint Summits on Translational Science. San Francisco, CA. March 2012.

  Abstract | pub-2012-071.pdf

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• Fung K, Xue Z, Ameye F, Gutierrez AR, D'Have A. Achieving Logical Equivalence between SNOMED CT and ICD-10-PCS Surgical Procedures. AMIA Annu Symp Proc. 2018 Apr 16;2017:724-733. eCollection 2017.

  Abstract | PMID:  29854138 | PMCID:  PMC5977651

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• Fung K, Gutierrez A, Ameye F, D’Have A, Ariel B. Demonstrating the Benefits of Mapping SNOMED CT to ICD-10-PCS through a Prototype Application for End User Implementation. SNOMED Expo Oct 2017, Bratislava, Slovakia pp. 0

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• Fung K. Medical Terminologies in Action Technical Report to the LHNCBC Board of Scientific Counselors September 2017

  Abstract | BOSC report_Sept 2017_FUNG_noCVb.pdf

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• Fung K. Dataset: SNOMED CT to ICD-10 Cross Map

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• Fung K. Dataset: SNOMED CT to ICD-10-CM Map

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• Fung K, Xu J, Rosenbloom ST, Mohr D, Maram N. Testing Three Problem List Terminologies in a simulated data entry environment. AMIA Annu Symp Proc. 2011;2011:445-54. Epub 2011 Oct 22.

  Abstract | PMID:  22195098 | PMCID:  PMC3243193

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