Zou J, Antani SK, Thoma GR.Localizing and Recognizing Labels for Multi-Panel Figures in Biomedical Journals. Proceedings of International Conference on Document Analysis and Recognition, November 13, 2017
Rajaraman S, Antani SK, Jaeger S.Visualizing Deep Learning Activations for Improved Malaria Cell Classification. Proceedings of The First Workshop in Medical Informatics and Healthcare (MIH 2017), Proceedings of Machine Learning Research (PMLR), v. 69, p. 40-47.
Mrabet Y, Kilicoglu H, Demner-Fushman D.TextFlow: A Text Similarity Measure based on Continuous Sequences. Proceedings of the 55th Annual Meeting of the Association for Computational Linguistics, 2017, Vancouver, Canada, July 30 - August 4, Volume
Kim I, Thoma GR.Machine Learning with Selective Word Statistics for Automated Classification of Citation Subjectivity in Online Biomedical Articles. Proc. Int’l Conf. Artificial Intelligence (ICAI’17), pp. 201-207, Las Vegas, July 2017.
Kim J, Hong S, Thoma GR.Labeling Author Affiliations in Biomedical Articles Using Markov Model Classifiers. The 13th International Conference on Data Mining (DMIN2017), pp. 105-110, Las Vegas, USA, July 2017.
Roberts K, Boland MR, Pruinelli L, Dcruz J, Berry A, Georgsson M, Hazen R, Sarmiento RF, Backonja U, Yu K-H, Jiang Y, Brennan PF.Biomedical informatics advancing the national health agenda: the AMIA 2015 year-in-review in clinical and consumer informatics. J Am Med Inform Assoc. 2017 Apr 1;24(e1):e185-e190. doi: 10.1093/jamia/ocw103.
Xue Z, Antani SK, Long LR, Thoma GR.Automatic multi-label annotation of abdominal CT images using CBIR. Proc. SPIE 10138, Medical Imaging 2017: Imaging Informatics for Healthcare, Research, and Applications, 1013807 (March 13, 2017); doi:10.1117/12.2254368.
Zhang, K, Demner-Fushman D.Automated classification of eligibility criteria in clinical trials to facilitate patient-trial matching for specific patient populations. J Am Med Inform Assoc. 2017 Feb 19. doi: 10.1093/jamia/ocw176. [Epub ahead of print]
Lure F, Jaeger S, Antani SK.Automated Systems for microscopic and radiographic tuberculosis screening. Electronic Journal of Emerging Infectious Diseases, Vol. 2, No. 1, pp. 5-9, February 2017. [In Chinese]
Demner-Fushman D, Rogers W, Aronson A.MetaMap Lite: an evaluation of a new Java implementation of MetaMap. J Am Med Inform Assoc. 2017 Jan 27. pii: ocw177. doi: 10.1093/jamia/ocw177. [Epub ahead of print]
Chachra S, Ben Abacha A, Shooshan SE, Rodriguez L, Demner-Fushman D.A Hybrid Approach to Generation of Missing Abstracts in Biomedical Literature. Proceedings of COLING 2016, the 26th International Conference on Computational Linguistics: Technical Papers: 1093-1100.
De Herrera A, Schaer R, Antani SK, Müller H.Using Crowdsourcing for Multi-label Biomedical Compound Figure Annotation. First International Workshop, LABELS 2016, and Second International Workshop, DLMIA 2016, Held in Conjunction with MICCAI 2016, Athens, Greece, October 21, 2016.
Borovikov E, Yershov S.On Virtual Characters that Can See 7th Annual International Conference on Biologically Inspired Cognitive Architectures, BICA 2016, held July 16 to July 19, 2016 in New York City, NY, USA
Jaeger S, Silamut K, Yu H, Poostchi Mohammadabadi M, Ersoy I, Powell A, Liang Z, Hossain M, Antani SK, Palaniappan K, Maude R, Thoma GR.Reducing the Diagnostic Burden of Malaria Using Microscopy Image Analysis and Machine Learning in the Field. Annual Meeting of the American Society of Tropical Medicine & Hygiene (ASTMH), Atlanta, USA, 2016.
Mrabet Y, Kilicoglu H, Roberts K, Demner-Fushman D.Combining Open-domain and Biomedical Knowledge for Topic Recognition in Consumer Health Questions. AMIA 2016 Annual Symposium, Chicago, IL, November 12-16, 2016.
Guo P, Stanley RJ, De S, Long LR, Antani SK, Thoma GR, Demner-Fushman D, Sornapudia S.Features Advances to Automatically Find Images for Application to Clinical Decision Support. Medical Research Archives. 4(7) 2016. DOI: 10.18103/mra.v4i7.761
Demner-Fushman D, Elhadad N.Aspiring to Unintended Consequences of Natural Language Processing: A Review of Recent Developments in Clinical and Consumer-Generated Text Processing. IMIA Yearbook of Medical Informatics 2016.
Villegas M, Müller R, De Herrera A, Schaer R, Bromuri S, Gilbert A, Piras L, Wang J, Yan F, Ramisa A, Dellandrea E, Gaizauskas R, Mikolajczyk K, Puigcerver J, Toselli A, Sánchez J, Vidal E.General Overview of ImageCLEF at the CLEF 2016 Labs. CLEF Proceedings, Springer, 2016
Xue Z, Rahman M, Antani SK, Long LR, Demner-Fushman D, Thoma GR.Modality Classification for Searching Figures in Biomedical Literature. Proceedings of the IEEE 29th International Symposium on Computer-Based Medical Systems, pp. 152-157, 2016. doi:10.1109/CBMS.2016.29.
Kim J, Thoma GR.Named Entity Recognition in Affiliations of Biomedical Articles Using Statistics and HMM Classifiers. The 2016 International Conference on Data Mining (DMIN2016), Las Vegas, USA, pp. 236-241, July, 2016.
Mrabet Y, Kilicoglu H, Demner-Fushman D.Unsupervised Ranking of Knowledge Bases for Named Entity Recognition. 22nd European Conference on Artificial Intelligence (ECAI 2016), The Hague, Holland, Aug 29 - Sep 02, 2016.
Demner-Fushman D, Antani SK, Chachra S, Kushnir M, Gayen S.Open-i Imaging informatics, natural language processing and multi-modal information retrieval - research and development Technical Report to the LHNCBC Board of Scientific Counselors September 2016
Wei W, Marmor R, Singh S, Wang S, Demner-Fushman D, Kuo TT, Hsu CN, Ohno-Machado L.Finding Related Publications: Extending the Set of Terms Used to Assess Article Similarity. AMIA Jt Summits Transl Sci Proc. 2016 Jul 20;2016:225-34. eCollection 2016.