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  • Zweigenbaum P, Demner-Fushman D. Advanced Literature-Mining Tools. In Edwards D, Stajich J, and Hansen D. (Editors). Bioinformatics: Tools and Applications. Springer 2009.
  • Van Der Volgen J, Harris BR, Demner-Fushman D. Analysis of Consumer Health Questions for Development of Question-Answering Technology [Poster]. Proceedings of One HEALTH: Information in an Interdependent World, the 2013 Annual Meeting and Exhibition of the Medical Library Association (MLA), 2013.
  • Aronson AR. API: Semantic Knowledge Representation
  • Demner-Fushman D, Elhadad N. Aspiring to Unintended Consequences of Natural Language Processing: A Review of Recent Developments in Clinical and Consumer-Generated Text Processing. IMIA Yearbook of Medical Informatics 2016.
  • Zweigenbaum P, Demner-Fushman D. Bioinformatics: Tools and Applications. Springer 2009.
  • Cohen KB, Demner-Fushman D. Biomedical Natural Language Processing John Benjamins Publishing Company, 2014. DOI: 10.1075/nlp.11
  • Simpson MS, Demner-Fushman D. Biomedical Text Mining: A Survey of Recent Progress. In Charu C. Aggarwal and ChengXiang Zhai, Editors. Mining Text Data. (Springer) 2011.
  • Williams R, Tse T, Zarin D. Characterizing sponsor-imposed restrictions on disclosing results of clinical trials. Presented at: Sixth International Congress on Peer Review and Biomedical Publication; September 2009; Vancouver, BC, Canada.
  • Lu C, Payne A, Demner-Fushman D. Classification Types: A New Feature in the SPECIALIST Lexicon. AMIA Fall Symposium, 2019.
  • Demner-Fushman D. Clinical, Consumer Health, and Visual Question Answering. Springer Nature Switzerland AG 2019. J. A. Lossio-Ventura et al. (Eds.): SIMBig 2018, CCIS 898, pp. 1–6, 2019.
  • Liu F, Fontelo P, Fiszman M. Clinically-Weighted Terms in the Evaluation of MeSH Translations: BabelMeSH in Portuguese as a Model. AMIA Annu Symp Proc; 2008 Nov 8-12; Washington DC. p. 1027.
  • Williams R, Tse T. ClinicalTrials.gov: A public database of clinical research. Presented at: American Public Health Association 137th Annual Meeting and Expo; November 2009; Philadelphia, PA.
  • Hristovski D, Kastrin A, Peterlin B, Rindflesch TC. Combining Semantic Relations and DNA Microarray Data for Novel Hypotheses Generation Lecture Notes in Bioinformatics. Springer
  • Long LR, Antani SK, Thoma GR, Deserno TM. Content-based Image Retrieval For Advancing Medical Diagnostics, Treatment, and Education New Technologies for Advancing Healthcare and Clinical Practices. June 2011:1-17.
  • Winnenburg R, Bodenreider O. Coverage of human phenotypes in SNOMED CT [Poster]. SNOMED CT Implementation Showcase, 2014.
  • Richesson RL, Fung K, Bodenreider O. Coverage of rare disease names in cinical coding systems and ontologies and implications for electronic health records-based research [Poster]. Proc 5th Int'l Conf Conference on Biomedical Ontology.
  • Khatipov E, Madden M, Chiang P, Chuang P, Nguyen D, D'Souza I, Winnenburg R, Bodenreider O, Skapik J, McClure R, Emrick S. Creating, maintaining and publishing value sets in the VSAC [Poster]. AMIA Annu Symp Proc, 2014: p. 1459.
  • Demner-Fushman D, Kilicoglu H. Dataset: CHQA Named Entity Dataset
  • Kilicoglu H. Dataset: Consumer Health Spelling Error Dataset
  • Demner-Fushman D, Roberts K. Dataset: Question Decomposition Data
  • Demner-Fushman D, Roberts K. Dataset: Question Type Data
  • Kilicoglu H. Dataset: Sortal Anaphora Dataset
  • Lu C, Browne AC. Development of sub-term mapping tools (STMT) [Poster]. AMIA 2012 Annual Symposium, Chicago, IL, November 3-7, 2012, p. 1845 (AMIA, 2012 Distinguished Poster Award) Poster.
  • Savery M, Huston M, Mork JG, Printseva O, Rae A, Schmidt S, Demner-Fushman D. Evaluation of System for Selective Indexing Classification. AMIA Fall Symposium, 2019.
  • Lu C, Tormey D, McDreedy L, Browne AC. Generating SD-Rules in the SPECISLIST Lexical Tools - Optimization for suffix derivation rule set [Poster]. BIOSTEC 2016), Vol(5): HEALTHINF, Rome, Italy, February 21-23, 2016, p. 353-358 (9th International Conference on Health Informatics, HEALTHINF/BIOSTEC, 2016 Best Poster Award

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