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  • Osborne R, Aronson A, Cohen K. A repository of semantic types in the MIMIC II database clinical notes. BioNLP 2014. pp. 93-97.
  • You D, Simpson M, Antani SK, Demner-Fushman D, Thoma GR. A robust pointer segmentation in biomedical images toward building a visual ontology for biomedical article retrieval. Proc. SPIE 8658, Document Recognition and Retrieval XX, 86580Q (February 4, 2013); doi:10.1117/12.2005934.
  • Liu J, Subramanian K, Yoo T, Van Uitert R. A Stable Optic-flow Based Method for Tracking Colonoscopy Images. Proceedings of MMBIA 2008, the IEEE Computer Society Workshop on Mathematical Methods in Biomedical Image Analysis; 2008 Jun 23-28; Anchorage, Alaska. DOI: 10.1109/CVPRW.2008.4562990.
  • Leroy G, Rindflesch TC, Libbus B, Kilicoglu H, Chen H. A Syntactic Parser with Semantic Filtering for Biomedical Text. Proceedings of Pacific Symposium on Biocomputing.
  • Guler, O, Yaniv Z. A tutorial on image guided therapy. Chapter 11 in: Birkfellner W, editor. Applied Medical Image Processing, Second Edition: A Basic Course. London: CRC Press; 2014. ISBN: 9781466555570.
  • Rahman MM, Antani SK, Demner-Fushman D, Thoma GR. A visual concept-based interactive biomedical image retrieval using entropy and spatial information. Proc. SPIE. 9418, Medical Imaging 2015: PACS and Imaging Informatics: Next Generation and Innovations, 94180U. (March 17, 2015) doi: 10.1117/12.2081456.
  • Xue Z, Long R, Antani SK, Thoma GR. A Web-accessible Content-based Cervicographic Image Retrieval System Proc SPIE Medical Imaging 2008. April 2008;6919:691907-1-9
  • Fontelo P, Nahin A, Liu F, Kim G, Ackerman MJ. Accessing MEDLINE/PubMed with Handheld Devices: Developments and New Search Portals. Proceedings of 38th Hawaii International Conference on System Sciences; 2005 Jan 3-6; Big Island, Hawaii; Track 6:158b. DOI Bookmark: http://doi.ieeecomputersociety.org/10.1109/HICSS.2005.64.
  • Liu J, Subramanian K, Yoo TS. Accurate motion parameter estimation for colonoscopy tracking using a regression method. In: Karssemeijer N, Summer RM, editors. Proceedings of SPIE Medical Imaging 2010: Computer-Aided Diagnosis; 2010 Feb 13-18; San Diego;7624:11 pages. DOI: 10.1117/12.844433.
  • Morse BS, Liu W, Yoo TS, Subramanian KR. Active contours using a constraint-based implicit representation. Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR); 2005 Jun 20-25; San Diego. 285-92. DOI: 10.1109/CVPR.2005.59.
  • Zweigenbaum P, Demner-Fushman D. Advanced Literature-Mining Tools. In Edwards D, Stajich J, and Hansen D. (Editors). Bioinformatics: Tools and Applications. Springer 2009.
  • Yoo TS. Advances Toward Understanding of Multimodal Volume Data. Proceedings of High Care 2000: Innovations in Medicine; 2000 Feb 25-27; Ruhr University, Bochum, Germany.
  • Almubarak H, Guo P, Stanley RJ, Long LR, Antani SK, Thoma GR. Algorithm Enhancements for Improvement of Localized Classification of Uterine Cervical Cancer Digital Histology Images. in Handbook of Research on Emerging Perspectives on Healthcare Information Systems and Informatics,. IGI Global (Hershey, PA).
  • Mrabet Y, Vougiouklis P, Kilicoglu H, Gardent C, Demner-Fushman D, Hare J, Simperl E. Aligning Texts and Knowledge Bases with Semantic Sentence Simplification. WebNLG 2016.
  • Pearson G, Gill MJ. An Evaluation of Motion JPEG 2000 for Video Archiving. Proc. Archiving 2005. Washington, D.C. April 2005:237-43.
  • Lynch P, Luan X, Prettyman M, Mericle L, Borkmann E, Schlaifer J. An evaluation of new and old similarity ranking algorithms. Proceedings of the International Conference on Information Technology: Coding and Computing (ITCC’04). 2004;2:148.
  • Marcelo AB, Fontelo P. An Evaluation of the Usability of Accessing MEDLINE over Short Messaging System. In: Kuhn KA, Warren JR, Leong T-Y, editors. Stud Health Technol Inform [Studies in Health Technology and Informatics] -- MEDINFO 2007: Proceedings of the 12th World Congress on Health (Medical) Informatics -- Building Sustainable Health Systems; 2007 Aug 20-24; Brisbane, Australia:235-6. IOS Press.
  • Jaeger S. An information-theoretic neural model based on concepts in Chinese medicine. 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW).
  • Caban JJ, Rheingans P, Yoo TS. An MRF-based Statistical Deformation Model for Morphological Image Analysis. IEEE Computer Society Workshop on Mathematical Models in Biomedical Image Analysis (MMBIA); 2010 Jun 14; San Francisco:31-8.
  • Xue Z, Antani SK, Long LR, Thoma GR. An online segmentation tool for cervicographic image analysis. ACM International Health Informatics Symposium, IHI 2010, Arlington, VA, USA, November 11 - 12, 2010, Proceedings; 01/2010.
  • Resnick MP, Ripple AM, Auston I, Rindflesch TC. An Ontology for Public Health to Support Enhanced Information Retrieval AMIA Annu Symp Proc. 2010
  • Banez RJ, Sarmiento R, Marcelo A, Fontelo P, Du B. An SMS Appointment Reminder System for Prenatal Care in Urban Health Care Centers in the Philippines. Telemed J E Health;16(S1):S-38. American Telemedicine Association 15th Annual International Meeting and Exposition; 2010 May 16-18; San Antonio, Texas.
  • Yoo TS, Morse B, Subramanian KR, Rheingans P, Ackerman MJ. Anatomical Modeling from Unstructured Samples Using Variational Implicit Surfaces. In: Westwood JD, Hoffman HM, Mogel GT, Stredney D, Robb RA, editors. Stud Health Technol Inform [Studies in Health Technology and Informatics] -- Proceedings of Medicine Meets Virtual Reality 2001;81:594-600. Amsterdam: IOS Press.
  • Ackerman MJ. Anatomy in the Digital Age. In: Rifkin BA, Ackerman MJ. Human Anatomy: From the Renaissance to the Digital Age. 2006 May 2. New York: Abrams. p. 318-329.
  • You D, Simpson M, Antani SK, Demner-Fushman D, Thoma GR. Annotating image ROIs with text descriptions for multimodal biomedical document retrieval. Proc. SPIE 8658, Document Recognition and Retrieval XX, 86580Q (February 4, 2013); doi:10.1117/12.2005934; http://dx.doi.org/10.1117/12.2005934.

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