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Fung K, Xu J, Rosenbloom ST, Mohr D, Maram N.Testing Three Problem List Terminologies in a simulated data entry environment. AMIA Annu Symp Proc. 2011;2011:445-54. Epub 2011 Oct 22.
Weeber M, Klein H, Aronson AR, Mork JG, de Jong-van den Berg LT, Vos R.Text-Based Discovery in Biomedicine: The Architecture of the DAD-System AMIA Annu Symp Proc. 2000 ;():903-7.
Mrabet Y, Kilicoglu H, Demner-Fushman D.TextFlow: A Text Similarity Measure based on Continuous Sequences. Proceedings of the 55th Annual Meeting of the Association for Computational Linguistics, 2017, Vancouver, Canada, July 30 - August 4, Volume
Browne AC, Kayaalp M, Dodd Z, Sagan, P, McDonald CJ.The Challenges of Creating a Gold Standard for De-identification Research. AMIA Annu Symp Proc. 2014 Nov 14;2014:353-8. eCollection 2014.
Homer ML, Palmer NP, Bodenreider O, Cami A, Chadwick L, Mandl KD.The Drug Data to Knowledge Pipeline: Large-Scale Claims Data Classification for Pharmacologic Insight. AMIA Jt Summits Transl Sci Proc. 2016 Jul 20;2016:105-11. eCollection 2016.
Zarin D, Tse T.The effect of funding source on outcome reporting among drug trials [Letter]. Ann Intern Med. 2011 Jan 18;154(2):137-8; author reply 138. doi: 10.7326/0003-4819-154-2-201101180-00020.
Leroy G, Fiszman M, Rindflesch TC.The Impact of Directionality in Predications on Text Mining Hawaii International Conference on System Sciences (HICSS-41), January 2008
Nguyen V, Bodenreider O, Minning T, Sheth AP.The knowledge-driven exploration of integrated biomedical knowledge sources facilitates the generation of new hypotheses Proceedings of the First International Workshop on Linked Science (LISC 2011) 2011:(electronic proceedings: http://ceur-ws.org/Vol-783/)
Bodenreider O, Smith B, Burugn A.The Ontology-Epistemology Divide: A Case Study in Medical Terminology Proceedings of the Third International Conference on Formal Ontology in Information Systems (FOIS2004): IOS Press; 2004. p. 185-195.
Dumontier M, Andersson B, Batchelor C, Domarew C, Jentzsch A, Luciano J, Pichler E, Prud'hommeaux E, Whetzel PL, Bodenreider O, Clark T, Harland L, Kashyap V, Kos P, Kozlovsky J, McGurk J, Ogbuji C, Samwald M, Schriml L, Tonellato PJ, Zhao J, Stephens S.The Translational Medicine Ontology: Driving Personalized Medicine by Bridging the Gap from Bedside to Bench Proceedings of the 13th ISMB'2010 SIG meeting Bio-ontologies 2010:120-123
Bangalore A, Thorn KE, Tilley C, Peters L.The UMLS knowledge source server: an object model for delivering UMLS data. AMIA Annu Symp Proc. 2003 Nov;:51-55.
Kilicoglu H, Demner-Fushman D, Rindflesch TC, Wilczynski NL, Haynes RB.Toward Automatic Recognition of High Quality Clinical Evidence. AMIA Annu Symp Proc. 2008 Nov 6:368
McDonald CJ, Fung K, Wang Y, Lynch P, Hook J, Vreeman D.Towards a standardized HL7 clinical data capture tool – with a trial implementation in NLM’s personal health record. 10th International HL7 Interoperability Conference. May 2009.