• Zeng K, Bodenreider O, Nelson SJ. Implementing RxNav, a RxNorm Browser Proc of Medical Informatics Europe 2005 (CD-ROM) 2005:1268.

  Abstract | pub2005037.pdf

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• Demner-Fushman D, Hauser SE, Thoma GR. The role of title, metadata and abstract in identifying clinically relevant journal articles. AMIA Annu Symp Proc. 2005:191-5.

  Abstract | pub2005046.pdf | PMID:  16779028 | PMCID:  PMC1560462

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• Lin J, Demner-Fushman D. "Bag of words" is not enough for strength of evidence classification AMIA Annu Symp Proc. 2005:1031.

  Abstract | PMID:  16779318 | PMCID:  PMC1560897

  Abstract
• Finnell JT, Overhage JM, McDonald CJ. In support of emergency department health information technology. AMIA Annu Symp Proc. 2005:246-50.

  Abstract | PMID:  16779039 | PMCID:  PMC1560807

  Abstract
• Kho A, Dexter P, Warvel J, Commiskey M, Wilson S, McDonald CJ. Computerized reminders to improve isolation rates of patients with drug-resistant infections: design and preliminary results. AMIA Annu Symp Proc. 2005:390-4.

  Abstract | PMID:  16779068 | PMCID:  PMC1560469

  Abstract
• Laflamme MR, Dexter PR, Graham MF, Hui SL, McDonald CJ. Efficiency, comprehensiveness and cost-effectiveness when comparing dictation and electronic templates for operative reports. AMIA Annu Symp Proc. 2005:425-9.

  Abstract | PMID:  16779075 | PMCID:  PMC1560865

  Abstract
• McDonald CJ, Dexter P, Schadow G, Chueh HC, Agernathy G, Hook J, Blevins L, Overhage JM, Berman JJ. SPIN query tools for de-identified research on a humongous database. AMIA Annu Symp Proc. 2005:515-9.

  Abstract | PMID:  16779093 | PMCID:  PMC1560587

  Abstract
• Vreeman DJ, McDonald CJ. Automated mapping of local radiology terms to LOINC. AMIA Annu Symp Proc. 2005:769-73.

  Abstract | PMID:  16779144 | PMCID:  PMC1560555

  Abstract
• Bodenreider O, Aubry M, Burgun A. From Functional Similarity Among Gene Products to Dependence Relations Among Gene Ontology Terms Proc SOFG, 2004:53.

  Abstract | pub2004069.pdf

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• Sehgal AK, Srinivasan P, Bodenreider O. Gene Terms and English Words: An Ambiguous Mix Proc of the SIGIR 2004 Workshop on Search and Discovery in Bioinformatics 2004.

  Abstract | pub2004071.pdf

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• Hole WT, Carlsen BA, Tuttle MS, Srinivasan S, Lipow SS, Olson NE, Sheretz DD, Humphreys BL. Achieving "source transparency" in the UMLS Metathesaurus. Stud Health Technol Inform. 2004;107(Pt 1):371-5.

  Abstract | pub2004-078.pdf | PMID:  15360837 | URL:  http://ebooks.iospress.nl/publication/21007

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• Azuaje FJ, Bodenreider O, Wang H, Dopazo J. Gene Ontology-Driven Similarity for Gene Expression Correlation Analysis Proceedings of the second conference on Standards and Ontologies for Functional Genomics (SOFG 2) 2004:47.

  Abstract

  Abstract
• Bodenreider O, Azuaje F. Incorporating Ontology-Driven Similarity Knowledge Into Functional Genomics: An Exploratory Study Proceedings of the 2004 IEEE Fourth Symposium on Bioinformatics and Bioengineering (BIBE-2004) 2004:317-324.

  Abstract | pub2004066.pdf

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• Bodenreider O, Smith B, Burugn A. The Ontology-Epistemology Divide: A Case Study in Medical Terminology Proceedings of the Third International Conference on Formal Ontology in Information Systems (FOIS2004): IOS Press; 2004. p. 185-195.

  Abstract | pub2004064.pdf

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• Wang H, Azuaje F, Bodenreider O, Dopazo J. Gene Expression Correlation and Gene Ontology-Based Similarity: An Assessment of Quantitative Relationships Proceedings of the 2004 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB'2004) 2004:25-31.

  Abstract | pub2004065.pdf

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• Bangalore A, Thorn KE, Tilley C, Peters L. The UMLS knowledge source server: an object model for delivering UMLS data. AMIA Annu Symp Proc. 2003 Nov;:51-55.

  Abstract | pub2003052.pdf | PMID:  14728132 | PMCID:  PMC1480045

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• Bodenreider O, Mitchell JA. Graphical Visualization and Navigation of Genetic Disease Information AMIA Annu Symp Proc. 2003:792.

  Abstract | pub2003054.pdf | PMID:  14728297 | PMCID:  PMC1479900

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• Bodenreider O. Strength in Numbers: Exploring Redundancy in Hierarchical Relations Across Biomedical Terminologies AMIA Annu Symp Proc. 2003:101-5.

  Abstract | pub2003053.pdf | PMID:  14728142 | PMCID:  PMC1480297

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• Zhang S, Bodenreider O. Aligning Representations of Anatomy Using Lexical and Structural Methods AMIA Annu Symp Proc. 2003 Nov;:753-757.

  Abstract | pub2003063.pdf | PMID:  14728274 | PMCID:  PMC1480279

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• Biondich PG, Anand V, Downd SM, McDonald CJ. Using adaptive turnaround documents to electronically acquire structured data in clinical settings. AMIA Annu Symp Proc. 2003:86-90.

  Abstract | PMID:  14728139 | PMCID:  PMC1480055

  Abstract
• Grannis SJ, Overhage JM, Hui S, McDonald CJ. Analysis of a probabilistic record linkage technique without human review. AMIA Annu Symp Proc. 2003:259-63.

  Abstract | PMID:  14728174 | PMCID:  PMC1479910

  Abstract
• Mamlin BW, Heinze DT, McDonald CJ. Automated extraction and normalization of findings from cancer-related free-text radiology reports. AMIA Annu Symp Proc. 2003:420-4.

  Abstract | PMID:  14728207 | PMCID:  PMC1479955

  Abstract
• Schadow G, McDonald CJ. Extracting structured information from free text pathology reports. AMIA Annu Symp Proc. 2003:584-8.

  Abstract | PMID:  14728240 | PMCID:  PMC1480213

  Abstract
• Weiner M, Schadow G, Lindbergh D, Warvel J, Abernathy G, Perkins SM, Fyffe J, Dexter PR, McDonald CJ. Clinicians' and patients' experiences and satisfaction with unscheduled, nighttime, Internet-based video conferencing for assessing acute medical problems in a nursing facility. AMIA Annu Symp Proc. 2003:709-13.

  Abstract | PMID:  14728265 | PMCID:  PMC1480309

  Abstract
• Bodenreider O. A Semantic Navigation Tool for the UMLS AMIA Annu Symp Proc. 2000;: 971.

  Abstract | pub2000035.pdf

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