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  • Azuaje F, Wang H, Zheng H, Bodenreider O, Chesneau A. Predictive Integration of Gene Ontology-Driven Similarity and Functional Interactions Proc ICDM 2006, Workshop on Data Mining in Bioinformatics: IEEE Computer Society Press; 2006. p. 114 - 119
  • Sahoo SS, Bodenreider O, Hitzler P, Sheth A, Thirunarayan K. Provenance Context Entity (PaCE): Scalable Provenance Tracking for Scientific RDF Data SSDBM: Springer, 2010. p. 461-470
  • Bodenreider O. Provenance information in biomedical knowledge repositories – A use case. Proceedings of the First International Workshop on the role of Semantic Web in Provenance Management (SWPM 2009), 2009: p. (electronic proceedings: http://ceur-ws.org/Vol-526/).
  • Adamusiak T, Bodenreider O. Quality assurance in LOINC using Description Logic. AMIA Annu Symp Proc. 2012;2012:1099-108. Epub 2012 Nov 3.
  • Bodenreider O, Bean CA. Relationships Among Knowledge Structures: Vocabulary Integration Within a Subject Domain. In: Bean A, Green R, editors. Relationships in the organization of knowledge. Springer; 2001. pp. 81-98.
  • Zeng K, Bodenreider O, Nelson SJ. RxNav: A Progress Report AMIA Annu Symp Proc 2005:1168
  • Zeng K, Bodenreider O, Kilbourne J, Nelson SJ. RxNav: A Web Service for Standard Drug Information AMIA Annu Symp Proc. 2006:1156
  • Zeng K, Bodenreider O, Kilbourne J, Nelson SJ. RxNav: An Integrated View on Drug Information Proc AMIA Annu Symp; 2007:1202
  • Zeng K, Bodenreider O, Kilbourne J, Nelson S. RxNav: Towards an Integrated View on Drug Information MEDINFO 2007:386.
  • Cameron D, Kavuluru R, Bodenreider O, Mendes PN, Sheth AP, Thirunarayan K. Semantic predications for complex information needs in biomedical literature BIBM 2011:512-519.
  • Rogers J, Bodenreider O. SNOMED CT: Browsing the Browsers Proc of the Third International Conference on Knowledge Representation in Medicine (KR-MED 2008) 2008:30-36
  • Bodenreider O, Zweigenbaum P. Strategies d'Identification des Noms Propres a Partir de Nomenclatures Medicales Paralleles Traitement Automatique des Langues. 2000;41(3):727-757.
  • Bodenreider O. Strength in Numbers: Exploring Redundancy in Hierarchical Relations Across Biomedical Terminologies AMIA Annu Symp Proc. 2003:101-5.
  • Rosemblat G, Tse T, Gemoets D, Gillen JE, Ide NC. Supporting Access to Consumer Health Information Across Languages Proc ICML-9, September 20-23, 2005; Salvador, Bahia, Brazil.
  • Gallagher ME, Moffatt C. Surviving Change: The First Step Toward Sustaining Your Digital Library In: J. Trant and D. Bearman (eds.). Museums and the Web 2006: Proceedings, Toronto: Archives & Museum Informatics, published March 1, 2006.
  • Homer ML, Palmer NP, Bodenreider O, Cami A, Chadwick L, Mandl KD. The Drug Data to Knowledge Pipeline: Large-Scale Claims Data Classification for Pharmacologic Insight. AMIA Jt Summits Transl Sci Proc. 2016 Jul 20;2016:105-11. eCollection 2016.
  • Nguyen V, Bodenreider O, Minning T, Sheth AP. The knowledge-driven exploration of integrated biomedical knowledge sources facilitates the generation of new hypotheses Proceedings of the First International Workshop on Linked Science (LISC 2011) 2011:(electronic proceedings: http://ceur-ws.org/Vol-783/)
  • Bodenreider O, Smith B, Burugn A. The Ontology-Epistemology Divide: A Case Study in Medical Terminology Proceedings of the Third International Conference on Formal Ontology in Information Systems (FOIS2004): IOS Press; 2004. p. 185-195.
  • Gallagher ME, Moffatt C. The Profiles in Science Digital Library: Behind the Scenes. Proc ACM/IEEE Joint Conf Digit Libr. 2012: 433–434. doi: 10.1145/2232817.2232928.
  • Tse T, Zarin D, Williams R, Ide N. The role and importance of clinical trial registries and results databases In: Gallin JI, Ognibene FP, eds, Principles and Practice of Clinical Research. 3rd ed. Amsterdam: Academic Press; 2012: 171-81.
  • Dumontier M, Andersson B, Batchelor C, Domarew C, Jentzsch A, Luciano J, Pichler E, Prud'hommeaux E, Whetzel PL, Bodenreider O, Clark T, Harland L, Kashyap V, Kos P, Kozlovsky J, McGurk J, Ogbuji C, Samwald M, Schriml L, Tonellato PJ, Zhao J, Stephens S. The Translational Medicine Ontology: Driving Personalized Medicine by Bridging the Gap from Bedside to Bench Proceedings of the 13th ISMB'2010 SIG meeting Bio-ontologies 2010:120-123
  • Bangalore A, Thorn KE, Tilley C, Peters L. The UMLS knowledge source server: an object model for delivering UMLS data. AMIA Annu Symp Proc. 2003 Nov;:51-55.
  • Dhombres F, Bodenreider O. Trends in Fetal Medicine: A 10-Year Bibliometric Analysis of Prenatal Diagnosis. Stud Health Technol Inform. 2017;245:853-857.
  • Burgun A, Mougin F, Bodenreider O. Two approaches to integrating phenotype and clinical information. AMIA Annu Symp Proc. 2009 Nov 14;2009:75-9.
  • Mrabet Y, Kilicoglu H, Demner-Fushman D. Unsupervised Ranking of Knowledge Bases for Named Entity Recognition. ECAI 2016, The Hague, The Netherlands, 1248-1255.
  • McCray AT, Dorfman E, Ripple A, Ide NC, Jha M, Katz DG, Loane RF, Tse T. Usability Issues in Developing a Web-Based Consumer Health Site Proc AMIA Symp. 2000:556-60.
  • Bodenreider O. Using SNOMED CT in combination with MedDRA for reporting signal detection and adverse drug reactions reporting. AMIA Annu Symp Proc. 2009 Nov 14;2009:45-9.
  • Wei D, Bodenreider O. Using the abstraction network in complement to description logics for quality assurance in biomedical terminologies - a case study in SNOMED CT. Stud Health Technol Inform. 2010;160(Pt 2):1070-4.
  • Peters L, Bodenreider O. Using the RxNorm Web Services API for Quality Assurance Purposes AMIA Annu Symp Proc. 2008 Nov 6:591-5.
  • Bodenreider O. Using UMLS semantics for classification purposes. Proc AMIA Symp. 2000:86-90.
  • Mougin F, Burgun A, Bodenreider O. Using WordNet to Improve the Mapping of Data Elements to UMLS for Data Sources Integration AMIA Annu Symp Proc. 2006:574-8
  • Fung KW, Bodenreider O. Utilizing the UMLS for Semantic Mapping between Terminologies. AMIA Annu Symp Proc. 2005:266-70.
  • Kayaalp M. Why Do We Need Probabilistic Approaches to Ontologies and the Associated Data? AMIA Annu Symp Proc. 2005:1005

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